AutoVOI

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The AutoVOI package contains the necessary codes for automated voxel prescription for single-voxel spectroscopy developed at the CMRR. The package contains both bash and python codes for the Linux server as well as Windows batch code for the MRI consoles. This package is available for use at other institutions on compatible 3T scanners by an agreement with CMRR. For sites with Siemens 3T MRI systems, a custom MRS pulse sequence package compatible with AutoVOI is available with a C2P agreement with CMRR and Siemens.

License

Obtaining a license

The available supported software versions are listed below. If you are interested in obtaining this pacakge, please follow this process to obtain a CMRR license:

  1. Select the license from the OTC website and complete the license agreement.
  2. CMRR will send you your account information and instructions for downloading the software.

Please note that the entire licensing process may take up to two weeks to process.

Once you have executed a Material Transfer Agreement and have been given an access password, the software can be downloaded here by selecting the desired release number.

Citation

If you publish or present results obtained using the software or sequences in this package, please acknowledge the researchers who developed the sequences using the following language:

Commercial use of AutoVOI is covered by the following patent:

US10641854B2 

Park YW, et al. AutoVOI: real-time automatic prescription of volume-of-interest for single voxel spectroscopy. Magn Reson Med. 2018; 80:1787-1798. doi: 10.1002/mrm.27203

Contact

If you have noticed a bug or have a request for a new feature in a future release, please contact

Gülin Öz. Be sure to include the sequence variant and the model of scanner you are using in the problem description.

Download

Version R001a


References

  1. Park YW, et al. AutoVOI: real-time automatic prescription of volume-of-interest for single voxel spectroscopy. Magn Reson Med. 2018; 80:1787-1798. doi: 10.1002/mrm.27203

Patents

US10641854B2 
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